Western Antarctic Peninsula Bacteria (Mesocosm exp.)

http://ipt.biodiversity.aq/resource.do?r=western_peninsula_microbes
Download dataset
organizationName Brown University
bounding Coordinates {"south":"-64.77","north":"-64.77","west":"-64.18","east":"-64.05"}
abstract Amplicon sequencing data of the 16S SSU rRNA marker gene of bacteria in four Mesososm experiments that spanned the spring transitional period (August–December 2013) in surface waters of the Western Antarctic Peninsula (WAP). Each mesocosm consisted of nearshore surface seawater (50 L) incubated in the laboratory for 10 days. Further details in: Luria, C. M., Amaral-Zettler, L. A., Ducklow, H. W., Repeta, D. J., Rhyne, A. L., & Rich, J. J. (2017). Seasonal shifts in bacterial community responses to phytoplankton-derived dissolved organic matter in the Western Antarctic Peninsula. Frontiers in microbiology, 8, 2117.

MiMarks Samples

Sequence sets

2009-11-16
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2009-11-18
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2009-11-23
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sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2009-11-30
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sra_accession_number sra_project_number sra_run_number
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2009-12-07
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sra_accession_number sra_project_number sra_run_number
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2009-12-14
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2009-12-28
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sra_accession_number sra_project_number sra_run_number
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2010-01-11
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2011-01-03
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2011-01-31
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2011-02-07
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2011-02-15
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2011-02-21
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sra_accession_number sra_project_number sra_run_number
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2011-03-07
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forward_primer reverse_primer forward_primer_sequence
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sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2011-03-14
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forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2011-03-21
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sra_accession_number sra_project_number sra_run_number
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2011-03-27
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8/29/2013
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2012-11-07
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2012-11-27
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2012-12-23
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2013-01-08
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forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2013-01-12
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
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2013-01-31
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9/8/2013
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2013-01-14
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2013-02-06
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2013-02-12
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2013-02-18
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2013-03-06
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
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2013-03-11
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sra_accession_number sra_project_number sra_run_number
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2013-03-18
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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10/26/2013
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11/1/2013
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11/5/2013
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
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11/6/2013
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2013-07-04
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
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8/6/2013
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8/12/2013
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2011-12-06
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
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2011-12-11
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8/16/2013
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2011-12-19
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2013-08-24
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forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2011-12-28
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2012-01-05
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2012-01-09
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2012-01-30
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2012-02-19
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forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2012-03-12
study_type target_gene target_taxa
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2012-10-31
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2012-03-01
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2012-11-14
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
9/4/2013
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2012-12-04
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forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2012-12-10
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forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2013-09-07T08:00
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forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2012-12-17
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2012-12-31
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2013-09-19T13:30
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forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2013-08-06
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2013-10-21T11:00
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2013-10-31T08:30
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2013-11-07T10:30
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2013-11-25T09:00
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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11/27/2013
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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12/3/2013
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
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number_of_spots_in_sra number_of_bases_predicted dataset_id
2013-12-04T08:30
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forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
12/7/2013
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2013-12-09T09:30
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2013-12-20T09:00
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2013-12-25T09:06
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
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2014-01-01T09:15
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forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2014-01-06T10:10
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
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2014-01-13T11:30
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forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
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2014-01-21T07:10
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2014-01-28T08:40
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forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
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2014-02-04T11:00
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genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2014-02-11T09:45
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2014-02-18T09:45
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2014-02-25T08:30
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2014-03-03T09:30
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2014-03-11T09:30
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2014-03-18T09:10
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
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