Geomicrobiology of Antarctic Subglacial Environments - Subglacial Lake Whillans

http://ipt.biodiversity.aq/resource.do?r=gbase
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organizationName Montana State University
bounding Coordinates {"south":"-85.02","north":"-83.79","west":"-155.33","east":"-131.77"}
abstract Liquid water has been known to occur beneath the Antarctic ice sheet for more than 40 years,but only recently have these subglacial aqueous environments been recognized as microbial ecosystems that may influence biogeochemical transformations on a global scale. Here we present the first geomicrobiological description of water and surficial sediments obtained from direct sampling of a subglacial Antarctic lake. Subglacial Lake Whillans (SLW)lies beneath approximately 800m of ice on the lower portion of the Whillans Ice Stream (WIS) in West Antarctica and is part of an extensive and evolving subglacial drainage network. The water column of SLW contained metabolically active microorganisms and was derived primarily from glacial ice melt with solute sources from lithogenic weathering and a minor seawater component. Heterotrophic and autotrophic production data together with small subunit ribosomal RNA gene sequencing and biogeochemical data indicate that SLW is a chemosynthetically driven ecosystem inhabited by a diverse assemblage of bacteria and archaea. Our results confirm that aquatic environments beneath the Antarctic ice sheet support viable microbial ecosystems, corroborating previous reports suggesting that they contain globally relevant pools of carbon and microbes that can mobilize elements from the lithosphere and influence Southern Ocean geochemical and biological systems.

MiMarks Samples

MiMARKS_investigation
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135
SLW sediment 4-6 cm SLW sediment 4-6 cm_unit SLW sediment 18-20 cm
SLW sediment 34-36 SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA
SLW sediment 2-4 cm rRNA SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA
SLW sediment 18-20 cm rRNA SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA
SLW water Cast 1 0.2 um rRNA SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA
SLW water Cast 1 10 um rRNA SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA
SLW water Cast 2 3.0 um rRNA SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA
SLW water Cast 3 0.8 um rRNA SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA
SRR1254121 SRR1254121_unit SRR1254122
SRR1254123 SRR1254123_unit SRR1254124
SRR1254125 SRR1254125_unit SRR1254126
SRR1254127 SRR1254127_unit SRR1254128
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135
SLW sediment 4-6 cm SLW sediment 4-6 cm_unit SLW sediment 18-20 cm
SLW sediment 34-36 SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA
SLW sediment 2-4 cm rRNA SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA
SLW sediment 18-20 cm rRNA SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA
SLW water Cast 1 0.2 um rRNA SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA
SLW water Cast 1 10 um rRNA SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA
SLW water Cast 2 3.0 um rRNA SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA
SLW water Cast 3 0.8 um rRNA SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA
SRR1254121 SRR1254121_unit SRR1254122
SRR1254123 SRR1254123_unit SRR1254124
SRR1254125 SRR1254125_unit SRR1254126
SRR1254127 SRR1254127_unit SRR1254128
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135
SLW sediment 4-6 cm SLW sediment 4-6 cm_unit SLW sediment 18-20 cm
SLW sediment 34-36 SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA
SLW sediment 2-4 cm rRNA SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA
SLW sediment 18-20 cm rRNA SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA
SLW water Cast 1 0.2 um rRNA SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA
SLW water Cast 1 10 um rRNA SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA
SLW water Cast 2 3.0 um rRNA SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA
SLW water Cast 3 0.8 um rRNA SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA
SRR1254121 SRR1254121_unit SRR1254122
SRR1254123 SRR1254123_unit SRR1254124
SRR1254125 SRR1254125_unit SRR1254126
SRR1254127 SRR1254127_unit SRR1254128
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135
SLW sediment 4-6 cm SLW sediment 4-6 cm_unit SLW sediment 18-20 cm
SLW sediment 34-36 SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA
SLW sediment 2-4 cm rRNA SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA
SLW sediment 18-20 cm rRNA SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA
SLW water Cast 1 0.2 um rRNA SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA
SLW water Cast 1 10 um rRNA SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA
SLW water Cast 2 3.0 um rRNA SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA
SLW water Cast 3 0.8 um rRNA SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA
SRR1254121 SRR1254121_unit SRR1254122
SRR1254123 SRR1254123_unit SRR1254124
SRR1254125 SRR1254125_unit SRR1254126
SRR1254127 SRR1254127_unit SRR1254128
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135
SLW sediment 4-6 cm SLW sediment 4-6 cm_unit SLW sediment 18-20 cm
SLW sediment 34-36 SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA
SLW sediment 2-4 cm rRNA SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA
SLW sediment 18-20 cm rRNA SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA
SLW water Cast 1 0.2 um rRNA SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA
SLW water Cast 1 10 um rRNA SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA
SLW water Cast 2 3.0 um rRNA SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA
SLW water Cast 3 0.8 um rRNA SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA
SRR1254121 SRR1254121_unit SRR1254122
SRR1254123 SRR1254123_unit SRR1254124
SRR1254125 SRR1254125_unit SRR1254126
SRR1254127 SRR1254127_unit SRR1254128
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135
SLW sediment 4-6 cm SLW sediment 4-6 cm_unit SLW sediment 18-20 cm
SLW sediment 34-36 SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA
SLW sediment 2-4 cm rRNA SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA
SLW sediment 18-20 cm rRNA SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA
SLW water Cast 1 0.2 um rRNA SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA
SLW water Cast 1 10 um rRNA SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA
SLW water Cast 2 3.0 um rRNA SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA
SLW water Cast 3 0.8 um rRNA SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA
SRR1254121 SRR1254121_unit SRR1254122
SRR1254123 SRR1254123_unit SRR1254124
SRR1254125 SRR1254125_unit SRR1254126
SRR1254127 SRR1254127_unit SRR1254128
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135
SLW sediment 4-6 cm SLW sediment 4-6 cm_unit SLW sediment 18-20 cm
SLW sediment 34-36 SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA
SLW sediment 2-4 cm rRNA SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA
SLW sediment 18-20 cm rRNA SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA
SLW water Cast 1 0.2 um rRNA SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA
SLW water Cast 1 10 um rRNA SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA
SLW water Cast 2 3.0 um rRNA SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA
SLW water Cast 3 0.8 um rRNA SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA
SRR1254121 SRR1254121_unit SRR1254122
SRR1254123 SRR1254123_unit SRR1254124
SRR1254125 SRR1254125_unit SRR1254126
SRR1254127 SRR1254127_unit SRR1254128
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135
SLW sediment 4-6 cm SLW sediment 4-6 cm_unit SLW sediment 18-20 cm
SLW sediment 34-36 SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA
SLW sediment 2-4 cm rRNA SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA
SLW sediment 18-20 cm rRNA SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA
SLW water Cast 1 0.2 um rRNA SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA
SLW water Cast 1 10 um rRNA SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA
SLW water Cast 2 3.0 um rRNA SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA
SLW water Cast 3 0.8 um rRNA SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA
SRR1254121 SRR1254121_unit SRR1254122
SRR1254123 SRR1254123_unit SRR1254124
SRR1254125 SRR1254125_unit SRR1254126
SRR1254127 SRR1254127_unit SRR1254128
MiMARKS_nucleic_acid_sequence_source
Structured Comment Name Structured Comment Name_unit units
SRR1254130_unit SRR1254131_unit SRR1254132_unit
SRR1254134_unit SRR1254135_unit SLW sediment 4-6 cm_unit
SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA_unit SLW sediment 2-4 cm rRNA_unit
SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA_unit SLW water Cast 1 0.2 um rRNA_unit
SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA_unit SLW water Cast 2 3.0 um rRNA_unit
SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA_unit SRR1254121_unit
SRR1254123_unit SRR1254124_unit SRR1254125_unit
MiMARKS_sequencing
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135
SLW sediment 4-6 cm SLW sediment 4-6 cm_unit SLW sediment 18-20 cm
SLW sediment 34-36 SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA
SLW sediment 2-4 cm rRNA SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA
SLW sediment 18-20 cm rRNA SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA
SLW water Cast 1 0.2 um rRNA SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA
SLW water Cast 1 10 um rRNA SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA
SLW water Cast 2 3.0 um rRNA SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA
SLW water Cast 3 0.8 um rRNA SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA
SRR1254121 SRR1254121_unit SRR1254122
SRR1254123 SRR1254123_unit SRR1254124
SRR1254125 SRR1254125_unit SRR1254126
SRR1254127 SRR1254127_unit SRR1254128
MiMARKS_sequencing
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135
SLW sediment 4-6 cm SLW sediment 4-6 cm_unit SLW sediment 18-20 cm
SLW sediment 34-36 SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA
SLW sediment 2-4 cm rRNA SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA
SLW sediment 18-20 cm rRNA SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA
SLW water Cast 1 0.2 um rRNA SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA
SLW water Cast 1 10 um rRNA SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA
SLW water Cast 2 3.0 um rRNA SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA
SLW water Cast 3 0.8 um rRNA SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA
SRR1254121 SRR1254121_unit SRR1254122
SRR1254123 SRR1254123_unit SRR1254124
SRR1254125 SRR1254125_unit SRR1254126
SRR1254127 SRR1254127_unit SRR1254128
MiMARKS_sequencing
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135
SLW sediment 4-6 cm SLW sediment 4-6 cm_unit SLW sediment 18-20 cm
SLW sediment 34-36 SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA
SLW sediment 2-4 cm rRNA SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA
SLW sediment 18-20 cm rRNA SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA
SLW water Cast 1 0.2 um rRNA SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA
SLW water Cast 1 10 um rRNA SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA
SLW water Cast 2 3.0 um rRNA SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA
SLW water Cast 3 0.8 um rRNA SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA
SRR1254121 SRR1254121_unit SRR1254122
SRR1254123 SRR1254123_unit SRR1254124
SRR1254125 SRR1254125_unit SRR1254126
SRR1254127 SRR1254127_unit SRR1254128
MiMARKS_sequencing
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135
SLW sediment 4-6 cm SLW sediment 4-6 cm_unit SLW sediment 18-20 cm
SLW sediment 34-36 SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA
SLW sediment 2-4 cm rRNA SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA
SLW sediment 18-20 cm rRNA SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA
SLW water Cast 1 0.2 um rRNA SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA
SLW water Cast 1 10 um rRNA SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA
SLW water Cast 2 3.0 um rRNA SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA
SLW water Cast 3 0.8 um rRNA SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA
SRR1254121 SRR1254121_unit SRR1254122
SRR1254123 SRR1254123_unit SRR1254124
SRR1254125 SRR1254125_unit SRR1254126
SRR1254127 SRR1254127_unit SRR1254128
MiMARKS_sequencing
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135
SLW sediment 4-6 cm SLW sediment 4-6 cm_unit SLW sediment 18-20 cm
SLW sediment 34-36 SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA
SLW sediment 2-4 cm rRNA SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA
SLW sediment 18-20 cm rRNA SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA
SLW water Cast 1 0.2 um rRNA SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA
SLW water Cast 1 10 um rRNA SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA
SLW water Cast 2 3.0 um rRNA SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA
SLW water Cast 3 0.8 um rRNA SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA
SRR1254121 SRR1254121_unit SRR1254122
SRR1254123 SRR1254123_unit SRR1254124
SRR1254125 SRR1254125_unit SRR1254126
SRR1254127 SRR1254127_unit SRR1254128
package_water
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135_unit
SLW sediment 4-6 cm_unit SLW sediment 18-20 cm SLW sediment 18-20 cm_unit
SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA SLW sediment 0-2 cm rRNA_unit
SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA SLW sediment 4-6 cm rRNA_unit
SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA SLW sediment 34-36 rRNA_unit
SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA SLW water Cast 1 3 um rRNA_unit
SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA SLW water Cast 2 0.2 um rRNA_unit
SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA SLW water Cast 3 0.2 um rRNA_unit
SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA SLW water Cast 3 3.0 um rRNA_unit
SRR1254121_unit SRR1254122 SRR1254122_unit
SRR1254123_unit SRR1254124 SRR1254124_unit
SRR1254125_unit SRR1254126 SRR1254126_unit
SRR1254127_unit SRR1254128 SRR1254128_unit
miscellaneous
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135_unit
SLW sediment 4-6 cm_unit SLW sediment 18-20 cm SLW sediment 18-20 cm_unit
SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA SLW sediment 0-2 cm rRNA_unit
SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA SLW sediment 4-6 cm rRNA_unit
SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA SLW sediment 34-36 rRNA_unit
SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA SLW water Cast 1 3 um rRNA_unit
SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA SLW water Cast 2 0.2 um rRNA_unit
SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA SLW water Cast 3 0.2 um rRNA_unit
SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA SLW water Cast 3 3.0 um rRNA_unit
SRR1254122_unit SRR1254123_unit SRR1254124_unit
SRR1254126_unit SRR1254127_unit SRR1254128_unit
miscellaneous
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135
SLW sediment 4-6 cm SLW sediment 4-6 cm_unit SLW sediment 18-20 cm
SLW sediment 34-36 SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA
SLW sediment 2-4 cm rRNA SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA
SLW sediment 18-20 cm rRNA SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA
SLW water Cast 1 0.2 um rRNA SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA
SLW water Cast 1 10 um rRNA SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA
SLW water Cast 2 3.0 um rRNA SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA
SLW water Cast 3 0.8 um rRNA SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA
SRR1254121 SRR1254121_unit SRR1254122
SRR1254123 SRR1254123_unit SRR1254124
SRR1254125 SRR1254125_unit SRR1254126
SRR1254127 SRR1254127_unit SRR1254128
miscellaneous
Structured Comment Name Structured Comment Name_unit units
SRR1254130_unit SRR1254131_unit SRR1254132_unit
SRR1254134_unit SRR1254135_unit SLW sediment 4-6 cm_unit
SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA_unit SLW sediment 2-4 cm rRNA_unit
SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA_unit SLW water Cast 1 0.2 um rRNA
SLW water Cast 1 3 um rRNA SLW water Cast 1 3 um rRNA_unit SLW water Cast 1 10 um rRNA
SLW water Cast 2 0.2 um rRNA SLW water Cast 2 0.2 um rRNA_unit SLW water Cast 2 3.0 um rRNA
SLW water Cast 3 0.2 um rRNA SLW water Cast 3 0.2 um rRNA_unit SLW water Cast 3 0.8 um rRNA
SLW water Cast 3 3.0 um rRNA SLW water Cast 3 3.0 um rRNA_unit SRR1254121_unit
SRR1254123_unit SRR1254124_unit SRR1254125_unit
MiMARKS_nucleic_acid_sequence_source
Structured Comment Name Structured Comment Name_unit units
SRR1254130_unit SRR1254131_unit SRR1254132_unit
SRR1254134_unit SRR1254135 SRR1254135_unit
SLW sediment 4-6 cm_unit SLW sediment 18-20 cm SLW sediment 18-20 cm_unit
SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA SLW sediment 0-2 cm rRNA_unit
SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA SLW sediment 4-6 cm rRNA_unit
SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA_unit SLW water Cast 1 0.2 um rRNA_unit
SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA_unit SLW water Cast 2 3.0 um rRNA_unit
SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA_unit SRR1254121_unit
SRR1254123_unit SRR1254124_unit SRR1254125_unit
package_sediment
Structured Comment Name Structured Comment Name_unit units
SRR1254130_unit SRR1254131_unit SRR1254132_unit
SRR1254134_unit SRR1254135_unit SLW sediment 4-6 cm_unit
SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA SLW sediment 0-2 cm rRNA_unit
SLW sediment 4-6 cm rRNA_unit SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA_unit
SLW water Cast 1 3 um rRNA_unit SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA_unit
SLW water Cast 3 0.2 um rRNA_unit SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA_unit
SRR1254122_unit SRR1254123_unit SRR1254124_unit
SRR1254126_unit SRR1254127_unit SRR1254128_unit
MiMARKS_sequencing
Structured Comment Name Structured Comment Name_unit units
SRR1254130 SRR1254130_unit SRR1254131
SRR1254132 SRR1254132_unit SRR1254133
SRR1254134 SRR1254134_unit SRR1254135
SLW sediment 4-6 cm SLW sediment 4-6 cm_unit SLW sediment 18-20 cm
SLW sediment 34-36 SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA
SLW sediment 2-4 cm rRNA SLW sediment 2-4 cm rRNA_unit SLW sediment 4-6 cm rRNA
SLW sediment 18-20 cm rRNA SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA
SLW water Cast 1 0.2 um rRNA SLW water Cast 1 0.2 um rRNA_unit SLW water Cast 1 3 um rRNA
SLW water Cast 1 10 um rRNA SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA
SLW water Cast 2 3.0 um rRNA SLW water Cast 2 3.0 um rRNA_unit SLW water Cast 3 0.2 um rRNA
SLW water Cast 3 0.8 um rRNA SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA
SRR1254121 SRR1254121_unit SRR1254122
SRR1254123 SRR1254123_unit SRR1254124
SRR1254125 SRR1254125_unit SRR1254126
SRR1254127 SRR1254127_unit SRR1254128
package_sediment
Structured Comment Name Structured Comment Name_unit units
SRR1254130_unit SRR1254131_unit SRR1254132_unit
SRR1254134_unit SRR1254135_unit SLW sediment 4-6 cm_unit
SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA SLW sediment 0-2 cm rRNA_unit
SLW sediment 4-6 cm rRNA_unit SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA_unit
SLW water Cast 1 3 um rRNA_unit SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA_unit
SLW water Cast 3 0.2 um rRNA_unit SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA_unit
SRR1254122_unit SRR1254123_unit SRR1254124_unit
SRR1254126_unit SRR1254127_unit SRR1254128_unit
package_sediment
Structured Comment Name Structured Comment Name_unit units
SRR1254130_unit SRR1254131_unit SRR1254132_unit
SRR1254134_unit SRR1254135_unit SLW sediment 4-6 cm_unit
SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA SLW sediment 0-2 cm rRNA_unit
SLW sediment 4-6 cm rRNA_unit SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA_unit
SLW water Cast 1 3 um rRNA_unit SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA_unit
SLW water Cast 3 0.2 um rRNA_unit SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA_unit
SRR1254122_unit SRR1254123_unit SRR1254124_unit
SRR1254126_unit SRR1254127_unit SRR1254128_unit
package_sediment
Structured Comment Name Structured Comment Name_unit units
SRR1254130_unit SRR1254131_unit SRR1254132_unit
SRR1254134_unit SRR1254135_unit SLW sediment 4-6 cm_unit
SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA SLW sediment 0-2 cm rRNA_unit
SLW sediment 4-6 cm rRNA_unit SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA_unit
SLW water Cast 1 3 um rRNA_unit SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA_unit
SLW water Cast 3 0.2 um rRNA_unit SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA_unit
SRR1254122_unit SRR1254123_unit SRR1254124_unit
SRR1254126_unit SRR1254127_unit SRR1254128_unit
package_sediment
Structured Comment Name Structured Comment Name_unit units
SRR1254130_unit SRR1254131_unit SRR1254132_unit
SRR1254134_unit SRR1254135_unit SLW sediment 4-6 cm_unit
SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA SLW sediment 0-2 cm rRNA_unit
SLW sediment 4-6 cm rRNA_unit SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA_unit
SLW water Cast 1 3 um rRNA_unit SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA_unit
SLW water Cast 3 0.2 um rRNA_unit SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA_unit
SRR1254122_unit SRR1254123_unit SRR1254124_unit
SRR1254126_unit SRR1254127_unit SRR1254128_unit
package_sediment
Structured Comment Name Structured Comment Name_unit units
SRR1254130_unit SRR1254131_unit SRR1254132_unit
SRR1254134_unit SRR1254135_unit SLW sediment 4-6 cm_unit
SLW sediment 34-36_unit SLW sediment 0-2 cm rRNA SLW sediment 0-2 cm rRNA_unit
SLW sediment 4-6 cm rRNA_unit SLW sediment 18-20 cm rRNA_unit SLW sediment 34-36 rRNA_unit
SLW water Cast 1 3 um rRNA_unit SLW water Cast 1 10 um rRNA_unit SLW water Cast 2 0.2 um rRNA_unit
SLW water Cast 3 0.2 um rRNA_unit SLW water Cast 3 0.8 um rRNA_unit SLW water Cast 3 3.0 um rRNA_unit
SRR1254122_unit SRR1254123_unit SRR1254124_unit
SRR1254126_unit SRR1254127_unit SRR1254128_unit

Sequence sets

2013-01-27
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology seq_yr
has_next_generation_sequence_output_data url_data_repository sra_accession_number
sra_run_number sra_sample_accession_numbers number_of_spots_in_sra
dataset_id created_at updated_at
2013-01-30
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology seq_yr
has_next_generation_sequence_output_data url_data_repository sra_accession_number
sra_run_number sra_sample_accession_numbers number_of_spots_in_sra
dataset_id created_at updated_at
2013-01-28
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology seq_yr
has_next_generation_sequence_output_data url_data_repository sra_accession_number
sra_run_number sra_sample_accession_numbers number_of_spots_in_sra
dataset_id created_at updated_at
Position: