Microorganisms (Bacteria, Archaea and phototroph eukaryotes) from Fildes Bay, King George Island, Antarctica

http://ipt.biodiversity.aq/resource.do?r=microbes_fildes_bay_antarctica
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organizationName Universidad Mayor
bounding Coordinates {"south":"-62.29","north":"-62.16","west":"-58.94","east":"-58.73"}
abstract Amplicon sequencing dataset (Illumina MiSeq and 454 pyrosequencing) of Bacteria and Archaea (16S ssu rRNA gene) and phototroph eukaryotes (16S chloroplast) from sea water in Fildes Bay, King George Island, Antarctica

MiMarks Samples

MiMARKS_investigation
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay
F-2 fildes bay 16S chloroplastidial F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial
IB-2 V4 16S rRNA amplicon from fildes bay IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay
IB-3 fildes bay 16S chloroplastidial IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay
N-4 V4 16S rRNA amplicon from fildes bay N-4 V4 16S rRNA amplicon from fildes bay_unit N-4 fildes bay 16S chloroplastidial
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay
F-2 fildes bay 16S chloroplastidial F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial
IB-2 V4 16S rRNA amplicon from fildes bay IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay
IB-3 fildes bay 16S chloroplastidial IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay
N-4 V4 16S rRNA amplicon from fildes bay N-4 V4 16S rRNA amplicon from fildes bay_unit N-4 fildes bay 16S chloroplastidial
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay
F-2 fildes bay 16S chloroplastidial F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial
IB-2 V4 16S rRNA amplicon from fildes bay IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay
IB-3 fildes bay 16S chloroplastidial IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay
N-4 V4 16S rRNA amplicon from fildes bay N-4 V4 16S rRNA amplicon from fildes bay_unit N-4 fildes bay 16S chloroplastidial
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay
F-2 fildes bay 16S chloroplastidial F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial
IB-2 V4 16S rRNA amplicon from fildes bay IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay
IB-3 fildes bay 16S chloroplastidial IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay
N-4 V4 16S rRNA amplicon from fildes bay N-4 V4 16S rRNA amplicon from fildes bay_unit N-4 fildes bay 16S chloroplastidial
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay
F-2 fildes bay 16S chloroplastidial F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial
IB-2 V4 16S rRNA amplicon from fildes bay IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay
IB-3 fildes bay 16S chloroplastidial IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay
N-4 V4 16S rRNA amplicon from fildes bay N-4 V4 16S rRNA amplicon from fildes bay_unit N-4 fildes bay 16S chloroplastidial
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay
F-2 fildes bay 16S chloroplastidial F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial
IB-2 V4 16S rRNA amplicon from fildes bay IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay
IB-3 fildes bay 16S chloroplastidial IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay
N-4 V4 16S rRNA amplicon from fildes bay N-4 V4 16S rRNA amplicon from fildes bay_unit N-4 fildes bay 16S chloroplastidial
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay
F-2 fildes bay 16S chloroplastidial F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial
IB-2 V4 16S rRNA amplicon from fildes bay IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay
IB-3 fildes bay 16S chloroplastidial IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay
N-4 V4 16S rRNA amplicon from fildes bay N-4 V4 16S rRNA amplicon from fildes bay_unit N-4 fildes bay 16S chloroplastidial
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay
F-2 fildes bay 16S chloroplastidial F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial
IB-2 V4 16S rRNA amplicon from fildes bay IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay
IB-3 fildes bay 16S chloroplastidial IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay
N-4 V4 16S rRNA amplicon from fildes bay N-4 V4 16S rRNA amplicon from fildes bay_unit N-4 fildes bay 16S chloroplastidial
MiMARKS_nucleic_acid_sequence_source
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial_unit C-5 fildes bay 16S chloroplastidial_unit
F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial_unit IB-2 V4 16S rRNA amplicon from fildes bay_unit
IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay_unit N-4 V4 16S rRNA amplicon from fildes bay_unit
MiMARKS_sequencing
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay
F-2 fildes bay 16S chloroplastidial F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial
IB-2 V4 16S rRNA amplicon from fildes bay IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay
IB-3 fildes bay 16S chloroplastidial IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay
N-4 V4 16S rRNA amplicon from fildes bay N-4 V4 16S rRNA amplicon from fildes bay_unit N-4 fildes bay 16S chloroplastidial
MiMARKS_sequencing
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial_unit
F-1 V4 16S rRNA amplicon from fildes bay F-1 V4 16S rRNA amplicon from fildes bay_unit F-2 fildes bay 16S chloroplastidial_unit
IB-2 V4 16S rRNA amplicon from fildes bay IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay
IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay N-2 V4 16S rRNA amplicon from fildes bay_unit
MiMARKS_sequencing
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay
F-2 fildes bay 16S chloroplastidial F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial
IB-2 V4 16S rRNA amplicon from fildes bay IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay
IB-3 fildes bay 16S chloroplastidial IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay
N-4 V4 16S rRNA amplicon from fildes bay N-4 V4 16S rRNA amplicon from fildes bay_unit N-4 fildes bay 16S chloroplastidial
MiMARKS_sequencing
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay
F-2 fildes bay 16S chloroplastidial F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial
IB-2 V4 16S rRNA amplicon from fildes bay IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay
IB-3 fildes bay 16S chloroplastidial IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay
N-4 V4 16S rRNA amplicon from fildes bay N-4 V4 16S rRNA amplicon from fildes bay_unit N-4 fildes bay 16S chloroplastidial
MiMARKS_sequencing
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay
F-2 fildes bay 16S chloroplastidial F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial
IB-2 V4 16S rRNA amplicon from fildes bay IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay
IB-3 fildes bay 16S chloroplastidial IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay
N-4 V4 16S rRNA amplicon from fildes bay N-4 V4 16S rRNA amplicon from fildes bay_unit N-4 fildes bay 16S chloroplastidial
miscellaneous
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay
F-2 fildes bay 16S chloroplastidial F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial
IB-2 V4 16S rRNA amplicon from fildes bay IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay
IB-3 fildes bay 16S chloroplastidial IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay
N-4 V4 16S rRNA amplicon from fildes bay N-4 V4 16S rRNA amplicon from fildes bay_unit N-4 fildes bay 16S chloroplastidial
package_water
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay
F-2 fildes bay 16S chloroplastidial F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial
IB-2 V4 16S rRNA amplicon from fildes bay IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay
IB-3 fildes bay 16S chloroplastidial IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay
N-4 V4 16S rRNA amplicon from fildes bay N-4 V4 16S rRNA amplicon from fildes bay_unit N-4 fildes bay 16S chloroplastidial
package_water
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay F-1 V4 16S rRNA amplicon from fildes bay_unit
F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial IB-1 fildes bay 16S chloroplastidial_unit
IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay IB-3 V4 16S rRNA amplicon from fildes bay_unit
IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay N-2 V4 16S rRNA amplicon from fildes bay_unit
package_water
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay F-1 V4 16S rRNA amplicon from fildes bay_unit
F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial IB-1 fildes bay 16S chloroplastidial_unit
IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay IB-3 V4 16S rRNA amplicon from fildes bay_unit
IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay N-2 V4 16S rRNA amplicon from fildes bay_unit
miscellaneous
Structured Comment Name Structured Comment Name_unit units
C-1 V4 16S rRNA amplicon from fildes bay C-1 V4 16S rRNA amplicon from fildes bay_unit C-1 fildes bay 16S chloroplastidial
C-5 fildes bay 16S chloroplastidial_unit F-1 V4 16S rRNA amplicon from fildes bay F-1 V4 16S rRNA amplicon from fildes bay_unit
F-2 fildes bay 16S chloroplastidial_unit IB-1 fildes bay 16S chloroplastidial IB-1 fildes bay 16S chloroplastidial_unit
IB-2 V4 16S rRNA amplicon from fildes bay_unit IB-3 V4 16S rRNA amplicon from fildes bay IB-3 V4 16S rRNA amplicon from fildes bay_unit
IB-3 fildes bay 16S chloroplastidial_unit N-2 V4 16S rRNA amplicon from fildes bay N-2 V4 16S rRNA amplicon from fildes bay_unit

Sequence sets

2012-02
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2012-02
study_type target_gene target_taxa
reverse_primer forward_primer_sequence reverse_primer_sequence
sequencing_technology has_next_generation_sequence_output_data url_data_repository
sra_project_number sra_run_number sra_sample_accession_numbers
number_of_bases_predicted dataset_id created_at
Position: