Microorganisms (Bacteria, Archaea and phototroph eukaryotes) from Fildes Bay, King George Island, Antarctica
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http://ipt.biodiversity.aq/resource.do?r=microbes_fildes_bay_antarctica |
| Download dataset |
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| organizationName | Universidad Mayor |
| bounding Coordinates | {"south":"-62.29","north":"-62.16","west":"-58.94","east":"-58.73"} |
| abstract | Amplicon sequencing dataset (Illumina MiSeq and 454 pyrosequencing) of Bacteria and Archaea (16S ssu rRNA gene) and phototroph eukaryotes (16S chloroplast) from sea water in Fildes Bay, King George Island, Antarctica |
MiMarks Samples
MiMARKS_investigation
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial | C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | |||
| F-2 fildes bay 16S chloroplastidial | F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | |||
| IB-2 V4 16S rRNA amplicon from fildes bay | IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | |||
| IB-3 fildes bay 16S chloroplastidial | IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | |||
| N-4 V4 16S rRNA amplicon from fildes bay | N-4 V4 16S rRNA amplicon from fildes bay_unit | N-4 fildes bay 16S chloroplastidial |
MiMARKS_environment
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial | C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | |||
| F-2 fildes bay 16S chloroplastidial | F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | |||
| IB-2 V4 16S rRNA amplicon from fildes bay | IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | |||
| IB-3 fildes bay 16S chloroplastidial | IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | |||
| N-4 V4 16S rRNA amplicon from fildes bay | N-4 V4 16S rRNA amplicon from fildes bay_unit | N-4 fildes bay 16S chloroplastidial |
MiMARKS_environment
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial | C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | |||
| F-2 fildes bay 16S chloroplastidial | F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | |||
| IB-2 V4 16S rRNA amplicon from fildes bay | IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | |||
| IB-3 fildes bay 16S chloroplastidial | IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | |||
| N-4 V4 16S rRNA amplicon from fildes bay | N-4 V4 16S rRNA amplicon from fildes bay_unit | N-4 fildes bay 16S chloroplastidial |
MiMARKS_environment
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial | C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | |||
| F-2 fildes bay 16S chloroplastidial | F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | |||
| IB-2 V4 16S rRNA amplicon from fildes bay | IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | |||
| IB-3 fildes bay 16S chloroplastidial | IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | |||
| N-4 V4 16S rRNA amplicon from fildes bay | N-4 V4 16S rRNA amplicon from fildes bay_unit | N-4 fildes bay 16S chloroplastidial |
MiMARKS_environment
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial | C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | |||
| F-2 fildes bay 16S chloroplastidial | F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | |||
| IB-2 V4 16S rRNA amplicon from fildes bay | IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | |||
| IB-3 fildes bay 16S chloroplastidial | IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | |||
| N-4 V4 16S rRNA amplicon from fildes bay | N-4 V4 16S rRNA amplicon from fildes bay_unit | N-4 fildes bay 16S chloroplastidial |
MiMARKS_environment
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial | C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | |||
| F-2 fildes bay 16S chloroplastidial | F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | |||
| IB-2 V4 16S rRNA amplicon from fildes bay | IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | |||
| IB-3 fildes bay 16S chloroplastidial | IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | |||
| N-4 V4 16S rRNA amplicon from fildes bay | N-4 V4 16S rRNA amplicon from fildes bay_unit | N-4 fildes bay 16S chloroplastidial |
MiMARKS_environment
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial | C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | |||
| F-2 fildes bay 16S chloroplastidial | F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | |||
| IB-2 V4 16S rRNA amplicon from fildes bay | IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | |||
| IB-3 fildes bay 16S chloroplastidial | IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | |||
| N-4 V4 16S rRNA amplicon from fildes bay | N-4 V4 16S rRNA amplicon from fildes bay_unit | N-4 fildes bay 16S chloroplastidial |
MiMARKS_environment
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial | C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | |||
| F-2 fildes bay 16S chloroplastidial | F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | |||
| IB-2 V4 16S rRNA amplicon from fildes bay | IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | |||
| IB-3 fildes bay 16S chloroplastidial | IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | |||
| N-4 V4 16S rRNA amplicon from fildes bay | N-4 V4 16S rRNA amplicon from fildes bay_unit | N-4 fildes bay 16S chloroplastidial |
MiMARKS_nucleic_acid_sequence_source
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial_unit | C-5 fildes bay 16S chloroplastidial_unit | |||
| F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial_unit | IB-2 V4 16S rRNA amplicon from fildes bay_unit | |||
| IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay_unit | N-4 V4 16S rRNA amplicon from fildes bay_unit |
MiMARKS_sequencing
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial | C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | |||
| F-2 fildes bay 16S chloroplastidial | F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | |||
| IB-2 V4 16S rRNA amplicon from fildes bay | IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | |||
| IB-3 fildes bay 16S chloroplastidial | IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | |||
| N-4 V4 16S rRNA amplicon from fildes bay | N-4 V4 16S rRNA amplicon from fildes bay_unit | N-4 fildes bay 16S chloroplastidial |
MiMARKS_sequencing
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial_unit | |||
| F-1 V4 16S rRNA amplicon from fildes bay | F-1 V4 16S rRNA amplicon from fildes bay_unit | F-2 fildes bay 16S chloroplastidial_unit | |||
| IB-2 V4 16S rRNA amplicon from fildes bay | IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | |||
| IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | N-2 V4 16S rRNA amplicon from fildes bay_unit |
MiMARKS_sequencing
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial | C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | |||
| F-2 fildes bay 16S chloroplastidial | F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | |||
| IB-2 V4 16S rRNA amplicon from fildes bay | IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | |||
| IB-3 fildes bay 16S chloroplastidial | IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | |||
| N-4 V4 16S rRNA amplicon from fildes bay | N-4 V4 16S rRNA amplicon from fildes bay_unit | N-4 fildes bay 16S chloroplastidial |
MiMARKS_sequencing
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial | C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | |||
| F-2 fildes bay 16S chloroplastidial | F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | |||
| IB-2 V4 16S rRNA amplicon from fildes bay | IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | |||
| IB-3 fildes bay 16S chloroplastidial | IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | |||
| N-4 V4 16S rRNA amplicon from fildes bay | N-4 V4 16S rRNA amplicon from fildes bay_unit | N-4 fildes bay 16S chloroplastidial |
MiMARKS_sequencing
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial | C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | |||
| F-2 fildes bay 16S chloroplastidial | F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | |||
| IB-2 V4 16S rRNA amplicon from fildes bay | IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | |||
| IB-3 fildes bay 16S chloroplastidial | IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | |||
| N-4 V4 16S rRNA amplicon from fildes bay | N-4 V4 16S rRNA amplicon from fildes bay_unit | N-4 fildes bay 16S chloroplastidial |
miscellaneous
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial | C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | |||
| F-2 fildes bay 16S chloroplastidial | F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | |||
| IB-2 V4 16S rRNA amplicon from fildes bay | IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | |||
| IB-3 fildes bay 16S chloroplastidial | IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | |||
| N-4 V4 16S rRNA amplicon from fildes bay | N-4 V4 16S rRNA amplicon from fildes bay_unit | N-4 fildes bay 16S chloroplastidial |
package_water
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial | C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | |||
| F-2 fildes bay 16S chloroplastidial | F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | |||
| IB-2 V4 16S rRNA amplicon from fildes bay | IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | |||
| IB-3 fildes bay 16S chloroplastidial | IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | |||
| N-4 V4 16S rRNA amplicon from fildes bay | N-4 V4 16S rRNA amplicon from fildes bay_unit | N-4 fildes bay 16S chloroplastidial |
package_water
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | F-1 V4 16S rRNA amplicon from fildes bay_unit | |||
| F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | IB-1 fildes bay 16S chloroplastidial_unit | |||
| IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | IB-3 V4 16S rRNA amplicon from fildes bay_unit | |||
| IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | N-2 V4 16S rRNA amplicon from fildes bay_unit |
package_water
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | F-1 V4 16S rRNA amplicon from fildes bay_unit | |||
| F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | IB-1 fildes bay 16S chloroplastidial_unit | |||
| IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | IB-3 V4 16S rRNA amplicon from fildes bay_unit | |||
| IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | N-2 V4 16S rRNA amplicon from fildes bay_unit |
miscellaneous
| Structured Comment Name | Structured Comment Name_unit | units | |||
| C-1 V4 16S rRNA amplicon from fildes bay | C-1 V4 16S rRNA amplicon from fildes bay_unit | C-1 fildes bay 16S chloroplastidial | |||
| C-5 fildes bay 16S chloroplastidial_unit | F-1 V4 16S rRNA amplicon from fildes bay | F-1 V4 16S rRNA amplicon from fildes bay_unit | |||
| F-2 fildes bay 16S chloroplastidial_unit | IB-1 fildes bay 16S chloroplastidial | IB-1 fildes bay 16S chloroplastidial_unit | |||
| IB-2 V4 16S rRNA amplicon from fildes bay_unit | IB-3 V4 16S rRNA amplicon from fildes bay | IB-3 V4 16S rRNA amplicon from fildes bay_unit | |||
| IB-3 fildes bay 16S chloroplastidial_unit | N-2 V4 16S rRNA amplicon from fildes bay | N-2 V4 16S rRNA amplicon from fildes bay_unit |
Sequence sets
2012-02
| study_type | target_gene | target_taxa | |||
| forward_primer | reverse_primer | forward_primer_sequence | |||
| genbank_contigs | sequencing_technology | has_next_generation_sequence_output_data | |||
| sra_accession_number | sra_project_number | sra_run_number | |||
| number_of_spots_in_sra | number_of_bases_predicted | dataset_id |
2012-02
| study_type | target_gene | target_taxa | |||
| reverse_primer | forward_primer_sequence | reverse_primer_sequence | |||
| sequencing_technology | has_next_generation_sequence_output_data | url_data_repository | |||
| sra_project_number | sra_run_number | sra_sample_accession_numbers | |||
| number_of_bases_predicted | dataset_id | created_at |
| Position: |
