Microorganisms (Bacteria 16S; Eukaryota 18S) from soil crusts in polar (Arctic and Antarctic) ecosystems
 |
http://ipt.biodiversity.aq/resource.do?r=microorganisms_polar_biological_soil_crusts |
| Download dataset |
|
| organizationName | University of Cologne |
| bounding Coordinates | {"south":"-62.665","north":"78.923","west":"-60.395","east":"15.761"} |
| abstract | Amplicon sequencing dataset (Illumina MiSeq) of Bacteria and Eukaryotes in Soil crusts on Svalbard and Antarctica |
MiMarks Samples
MiMARKS_investigation
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D | JD_16S_D_unit | JD_18S_D | |||
| JD_16S_R | JD_16S_R_unit | JD_18S_R | |||
| MC | MC_unit | NA_16S_D | |||
| NA_18S_D | NA_18S_D_unit | NA_16S_R | |||
| NA_18S_R | NA_18S_R_unit | TD_16S |
MiMARKS_environment
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D | JD_16S_D_unit | JD_18S_D | |||
| JD_16S_R | JD_16S_R_unit | JD_18S_R | |||
| MC | MC_unit | NA_16S_D | |||
| NA_18S_D | NA_18S_D_unit | NA_16S_R | |||
| NA_18S_R | NA_18S_R_unit | TD_16S |
MiMARKS_environment
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D | JD_16S_D_unit | JD_18S_D | |||
| JD_16S_R | JD_16S_R_unit | JD_18S_R | |||
| MC_unit | NA_16S_D | NA_16S_D_unit | |||
| NA_18S_D_unit | NA_16S_R | NA_16S_R_unit | |||
| NA_18S_R_unit | TD_16S | TD_16S_unit |
MiMARKS_environment
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D | JD_16S_D_unit | JD_18S_D | |||
| JD_16S_R | JD_16S_R_unit | JD_18S_R | |||
| MC | MC_unit | NA_16S_D | |||
| NA_18S_D | NA_18S_D_unit | NA_16S_R | |||
| NA_18S_R | NA_18S_R_unit | TD_16S |
MiMARKS_environment
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D | JD_16S_D_unit | JD_18S_D | |||
| JD_16S_R | JD_16S_R_unit | JD_18S_R | |||
| MC | MC_unit | NA_16S_D | |||
| NA_18S_D | NA_18S_D_unit | NA_16S_R | |||
| NA_18S_R | NA_18S_R_unit | TD_16S |
MiMARKS_environment
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D | JD_16S_D_unit | JD_18S_D | |||
| JD_16S_R | JD_16S_R_unit | JD_18S_R | |||
| MC | MC_unit | NA_16S_D | |||
| NA_18S_D | NA_18S_D_unit | NA_16S_R | |||
| NA_18S_R | NA_18S_R_unit | TD_16S |
MiMARKS_environment
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D | JD_16S_D_unit | JD_18S_D | |||
| JD_16S_R | JD_16S_R_unit | JD_18S_R | |||
| MC | MC_unit | NA_16S_D | |||
| NA_18S_D | NA_18S_D_unit | NA_16S_R | |||
| NA_18S_R | NA_18S_R_unit | TD_16S |
MiMARKS_environment
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D | JD_16S_D_unit | JD_18S_D | |||
| JD_16S_R | JD_16S_R_unit | JD_18S_R | |||
| MC_unit | NA_16S_D | NA_16S_D_unit | |||
| NA_18S_D_unit | NA_16S_R | NA_16S_R_unit | |||
| NA_18S_R_unit | TD_16S | TD_16S_unit |
MiMARKS_nucleic_acid_sequence_source
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S_unit | BG_18S_unit | ED_16S_unit | |||
| JD_16S_D_unit | JD_18S_D_unit | JD_16S_R_unit | |||
| MC_unit | NA_16S_D_unit | NA_18S_D_unit |
MiMARKS_sequencing
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D | JD_16S_D_unit | JD_18S_D | |||
| JD_16S_R | JD_16S_R_unit | JD_18S_R | |||
| MC | MC_unit | NA_16S_D | |||
| NA_18S_D | NA_18S_D_unit | NA_16S_R | |||
| NA_18S_R | NA_18S_R_unit | TD_16S |
MiMARKS_sequencing
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D | JD_16S_D_unit | JD_18S_D | |||
| JD_16S_R | JD_16S_R_unit | JD_18S_R | |||
| MC | MC_unit | NA_16S_D | |||
| NA_18S_D | NA_18S_D_unit | NA_16S_R | |||
| NA_18S_R | NA_18S_R_unit | TD_16S |
MiMARKS_sequencing
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D | JD_16S_D_unit | JD_18S_D | |||
| JD_16S_R | JD_16S_R_unit | JD_18S_R | |||
| MC | MC_unit | NA_16S_D | |||
| NA_18S_D | NA_18S_D_unit | NA_16S_R | |||
| NA_18S_R | NA_18S_R_unit | TD_16S |
MiMARKS_sequencing
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D | JD_16S_D_unit | JD_18S_D | |||
| JD_16S_R | JD_16S_R_unit | JD_18S_R | |||
| MC | MC_unit | NA_16S_D | |||
| NA_18S_D | NA_18S_D_unit | NA_16S_R | |||
| NA_18S_R | NA_18S_R_unit | TD_16S |
MiMARKS_sequencing
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D | JD_16S_D_unit | JD_18S_D | |||
| JD_16S_R | JD_16S_R_unit | JD_18S_R | |||
| MC | MC_unit | NA_16S_D | |||
| NA_18S_D | NA_18S_D_unit | NA_16S_R | |||
| NA_18S_R | NA_18S_R_unit | TD_16S |
MiMARKS_nucleic_acid_sequence_source
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D | JD_16S_D_unit | JD_18S_D | |||
| JD_16S_R | JD_16S_R_unit | JD_18S_R | |||
| MC_unit | NA_16S_D | NA_16S_D_unit | |||
| NA_18S_D_unit | NA_16S_R | NA_16S_R_unit | |||
| NA_18S_R_unit | TD_16S | TD_16S_unit |
miscellaneous
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D | JD_16S_D_unit | JD_18S_D | |||
| JD_16S_R | JD_16S_R_unit | JD_18S_R | |||
| MC | MC_unit | NA_16S_D | |||
| NA_18S_D | NA_18S_D_unit | NA_16S_R | |||
| NA_18S_R | NA_18S_R_unit | TD_16S |
miscellaneous
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D | JD_16S_D_unit | JD_18S_D | |||
| JD_16S_R | JD_16S_R_unit | JD_18S_R | |||
| MC | MC_unit | NA_16S_D | |||
| NA_18S_D | NA_18S_D_unit | NA_16S_R | |||
| NA_18S_R | NA_18S_R_unit | TD_16S |
miscellaneous
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D_unit | JD_18S_D_unit | JD_16S_R_unit | |||
| MC_unit | NA_16S_D | NA_16S_D_unit | |||
| NA_18S_D_unit | NA_16S_R | NA_16S_R_unit | |||
| NA_18S_R_unit | TD_16S | TD_16S_unit |
package_microbial mat/biofilm
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D_unit | JD_18S_D_unit | JD_16S_R_unit | |||
| MC_unit | NA_16S_D | NA_16S_D_unit | |||
| NA_18S_D_unit | NA_16S_R | NA_16S_R_unit | |||
| NA_18S_R_unit | TD_16S | TD_16S_unit |
package_microbial mat/biofilm
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D_unit | JD_18S_D_unit | JD_16S_R_unit | |||
| MC_unit | NA_16S_D | NA_16S_D_unit | |||
| NA_18S_D_unit | NA_16S_R | NA_16S_R_unit | |||
| NA_18S_R_unit | TD_16S | TD_16S_unit |
miscellaneous
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D_unit | JD_18S_D_unit | JD_16S_R_unit | |||
| MC_unit | NA_16S_D | NA_16S_D_unit | |||
| NA_18S_D_unit | NA_16S_R | NA_16S_R_unit | |||
| NA_18S_R_unit | TD_16S | TD_16S_unit |
package_water
| Structured Comment Name | Structured Comment Name_unit | units | |||
| BG_16S | BG_16S_unit | BG_18S | |||
| ED_16S | ED_16S_unit | ED_18S | |||
| JD_16S_D_unit | JD_18S_D_unit | JD_16S_R_unit | |||
| MC_unit | NA_16S_D | NA_16S_D_unit | |||
| NA_18S_D_unit | NA_16S_R | NA_16S_R_unit | |||
| NA_18S_R_unit | TD_16S | TD_16S_unit |
Sequence sets
2014-08-27
| study_type | target_gene | target_taxa | |||
| forward_primer | reverse_primer | forward_primer_sequence | |||
| genbank_contigs | sequencing_technology | run_type | |||
| url_data_repository | sra_accession_number | sra_project_number | |||
| sra_sample_accession_numbers | number_of_spots_in_sra | number_of_bases_predicted |
2014-08-27
| study_type | target_gene | target_taxa | |||
| forward_primer | reverse_primer | forward_primer_sequence | |||
| genbank_contigs | sequencing_technology | run_type | |||
| url_data_repository | sra_accession_number | sra_project_number | |||
| sra_sample_accession_numbers | number_of_spots_in_sra | number_of_bases_predicted |
2015-02-05
| study_type | target_gene | target_taxa | |||
| forward_primer | reverse_primer | forward_primer_sequence | |||
| genbank_contigs | sequencing_technology | run_type | |||
| url_data_repository | sra_accession_number | sra_project_number | |||
| sra_sample_accession_numbers | number_of_spots_in_sra | number_of_bases_predicted |
2015-02-05
| study_type | target_gene | target_taxa | |||
| forward_primer | reverse_primer | forward_primer_sequence | |||
| genbank_contigs | sequencing_technology | run_type | |||
| url_data_repository | sra_accession_number | sra_project_number | |||
| sra_sample_accession_numbers | number_of_spots_in_sra | number_of_bases_predicted |
2007-02
| study_type | target_gene | target_taxa | |||
| forward_primer | reverse_primer | forward_primer_sequence | |||
| genbank_contigs | sequencing_technology | run_type | |||
| url_data_repository | sra_accession_number | sra_project_number | |||
| sra_sample_accession_numbers | number_of_spots_in_sra | number_of_bases_predicted |
2014-08-24
| study_type | target_gene | target_taxa | |||
| forward_primer | reverse_primer | forward_primer_sequence | |||
| genbank_contigs | sequencing_technology | run_type | |||
| url_data_repository | sra_accession_number | sra_project_number | |||
| sra_sample_accession_numbers | number_of_spots_in_sra | number_of_bases_predicted |
2014-08-24
| study_type | target_gene | target_taxa | |||
| forward_primer | reverse_primer | forward_primer_sequence | |||
| genbank_contigs | sequencing_technology | run_type | |||
| url_data_repository | sra_accession_number | sra_project_number | |||
| sra_sample_accession_numbers | number_of_spots_in_sra | number_of_bases_predicted |
2014-08-28
| study_type | target_gene | target_taxa | |||
| forward_primer | reverse_primer | forward_primer_sequence | |||
| genbank_contigs | sequencing_technology | run_type | |||
| url_data_repository | sra_accession_number | sra_project_number | |||
| sra_sample_accession_numbers | number_of_spots_in_sra | number_of_bases_predicted |
2014-08-28
| study_type | target_gene | target_taxa | |||
| forward_primer | reverse_primer | forward_primer_sequence | |||
| genbank_contigs | sequencing_technology | run_type | |||
| url_data_repository | sra_accession_number | sra_project_number | |||
| sra_sample_accession_numbers | number_of_spots_in_sra | number_of_bases_predicted |
| Position: |
