Microbiome (Bacteria, Archaea and fungi) from University Valley Permafrost cores (Antarctica)
![]() |
http://ipt.biodiversity.aq/resource.do?r=microbiome_university_valley_permafrost_antarctica |
Download dataset |
![]() |
organizationName | McGill University |
bounding Coordinates | {"south":"-77.864","north":"-77.864","west":"160.729","east":"160.729"} |
abstract | Amplicon sequencing dataset (Bacteria and Archaea based on 16S ssu rRNA gene, Fungi and other eukaryotes, based on the ITS marker) of microorganisms in permafrost samples (two cores with three different depths) taken in University Valley, Antarctica. |
MiMarks Samples
MiMARKS_sequencing
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
MiMARKS_sequencing
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
MiMARKS_investigation
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
MiMARKS_environment
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
MiMARKS_environment
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
MiMARKS_environment
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
MiMARKS_environment
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
MiMARKS_environment
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
MiMARKS_environment
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
MiMARKS_environment
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
MiMARKS_nucleic_acid_sequence_source
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B_unit | UVMIT0-5_A_unit | UVMIT0-5_F_unit | |||
UVMIT25-30_F_unit | UVMIT25-30_B_unit | UVMITsoil_A_unit | |||
UVMITsoil_F_unit | UVSIT0-5_B_unit | UVSIT0-5_A_unit | |||
UVSIT20-25_B_unit | UVSIT20-25_A_unit | UVSIT20-25_F_unit | |||
UVSIT45-50_A_unit | UVSIT45-50_F_unit | UVSITsoil_A_unit |
MiMARKS_sequencing
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
MiMARKS_sequencing
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B_unit | UVMIT0-5_A_unit | UVMIT0-5_F | |||
UVMIT25-30_A_unit | UVMIT25-30_F | UVMIT25-30_F_unit | |||
UVMITsoil_A_unit | UVMITsoil_B_unit | UVMITsoil_F | |||
UVSIT0-5_B_unit | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B_unit | UVSIT20-25_A_unit | UVSIT20-25_F | |||
UVSIT45-50_B_unit | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A_unit | UVSITsoil_F | UVSITsoil_F_unit |
MiMARKS_sequencing
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
package_soil
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
package_soil
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
miscellaneous
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
miscellaneous
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
miscellaneous
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B | UVMIT0-5_B_unit | UVMIT0-5_A | |||
UVMIT0-5_F | UVMIT0-5_F_unit | UVMIT25-30_A | |||
UVMIT25-30_F | UVMIT25-30_F_unit | UVMIT25-30_B | |||
UVMITsoil_A | UVMITsoil_A_unit | UVMITsoil_B | |||
UVMITsoil_F | UVMITsoil_F_unit | UVSIT0-5_B | |||
UVSIT0-5_A | UVSIT0-5_A_unit | UVSIT0-5_F | |||
UVSIT20-25_B | UVSIT20-25_B_unit | UVSIT20-25_A | |||
UVSIT20-25_F | UVSIT20-25_F_unit | UVSIT45-50_B | |||
UVSIT45-50_A | UVSIT45-50_A_unit | UVSIT45-50_F | |||
UVSITsoil_A | UVSITsoil_A_unit | UVSITsoil_F |
package_sediment
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B_unit | UVMIT0-5_A_unit | UVMIT0-5_F_unit | |||
UVMIT25-30_F_unit | UVMIT25-30_B_unit | UVMITsoil_A | |||
UVMITsoil_B | UVMITsoil_B_unit | UVMITsoil_F | |||
UVSIT0-5_B | UVSIT0-5_B_unit | UVSIT0-5_A | |||
UVSIT0-5_F | UVSIT0-5_F_unit | UVSIT20-25_B | |||
UVSIT20-25_A | UVSIT20-25_A_unit | UVSIT20-25_F | |||
UVSIT45-50_B | UVSIT45-50_B_unit | UVSIT45-50_A | |||
UVSIT45-50_F | UVSIT45-50_F_unit | UVSITsoil_A | |||
UVSITsoil_F | UVSITsoil_F_unit | UVSITsoil_B |
package_sediment
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B_unit | UVMIT0-5_A_unit | UVMIT0-5_F_unit | |||
UVMIT25-30_F_unit | UVMIT25-30_B_unit | UVMITsoil_A | |||
UVMITsoil_B | UVMITsoil_B_unit | UVMITsoil_F | |||
UVSIT0-5_B | UVSIT0-5_B_unit | UVSIT0-5_A | |||
UVSIT0-5_F | UVSIT0-5_F_unit | UVSIT20-25_B | |||
UVSIT20-25_A | UVSIT20-25_A_unit | UVSIT20-25_F | |||
UVSIT45-50_B | UVSIT45-50_B_unit | UVSIT45-50_A | |||
UVSIT45-50_F | UVSIT45-50_F_unit | UVSITsoil_A | |||
UVSITsoil_F | UVSITsoil_F_unit | UVSITsoil_B |
package_soil
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B_unit | UVMIT0-5_A_unit | UVMIT0-5_F_unit | |||
UVMIT25-30_F_unit | UVMIT25-30_B_unit | UVMITsoil_A | |||
UVMITsoil_B | UVMITsoil_B_unit | UVMITsoil_F | |||
UVSIT0-5_B | UVSIT0-5_B_unit | UVSIT0-5_A | |||
UVSIT0-5_F | UVSIT0-5_F_unit | UVSIT20-25_B | |||
UVSIT20-25_A | UVSIT20-25_A_unit | UVSIT20-25_F | |||
UVSIT45-50_B | UVSIT45-50_B_unit | UVSIT45-50_A | |||
UVSIT45-50_F | UVSIT45-50_F_unit | UVSITsoil_A | |||
UVSITsoil_F | UVSITsoil_F_unit | UVSITsoil_B |
package_soil
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B_unit | UVMIT0-5_A_unit | UVMIT0-5_F_unit | |||
UVMIT25-30_F_unit | UVMIT25-30_B_unit | UVMITsoil_A | |||
UVMITsoil_B | UVMITsoil_B_unit | UVMITsoil_F | |||
UVSIT0-5_B | UVSIT0-5_B_unit | UVSIT0-5_A | |||
UVSIT0-5_F | UVSIT0-5_F_unit | UVSIT20-25_B | |||
UVSIT20-25_A | UVSIT20-25_A_unit | UVSIT20-25_F | |||
UVSIT45-50_B | UVSIT45-50_B_unit | UVSIT45-50_A | |||
UVSIT45-50_F | UVSIT45-50_F_unit | UVSITsoil_A | |||
UVSITsoil_F | UVSITsoil_F_unit | UVSITsoil_B |
miscellaneous
Structured Comment Name | Structured Comment Name_unit | units | |||
UVMIT0-5_B_unit | UVMIT0-5_A_unit | UVMIT0-5_F_unit | |||
UVMIT25-30_F_unit | UVMIT25-30_B_unit | UVMITsoil_A | |||
UVMITsoil_B | UVMITsoil_B_unit | UVMITsoil_F | |||
UVSIT0-5_B | UVSIT0-5_B_unit | UVSIT0-5_A | |||
UVSIT0-5_F | UVSIT0-5_F_unit | UVSIT20-25_B | |||
UVSIT20-25_A | UVSIT20-25_A_unit | UVSIT20-25_F | |||
UVSIT45-50_B | UVSIT45-50_B_unit | UVSIT45-50_A | |||
UVSIT45-50_F | UVSIT45-50_F_unit | UVSITsoil_A | |||
UVSITsoil_F | UVSITsoil_F_unit | UVSITsoil_B |
Sequence sets
2009-12
study_type | target_gene | target_taxa | |||
forward_primer | reverse_primer | forward_primer_sequence | |||
genbank_contigs | sequencing_technology | has_next_generation_sequence_output_data | |||
sra_accession_number | sra_project_number | sra_run_number | |||
number_of_spots_in_sra | number_of_bases_predicted | dataset_id |
2009-12
study_type | target_gene | target_taxa | |||
reverse_primer | forward_primer_sequence | reverse_primer_sequence | |||
sequencing_technology | has_next_generation_sequence_output_data | url_data_repository | |||
sra_project_number | sra_run_number | sra_sample_accession_numbers | |||
number_of_bases_predicted | dataset_id | created_at |
Position: |