Microorganisms in Paleomats at the shores of lake Vanda, Antarctica

http://ipt.biodiversity.aq/resource.do?r=lake_vanda_paleomat_microbial_community_antarctica
Download dataset
organizationName Georgetown University
bounding Coordinates {"south":"-77.519","north":"-77.519","west":"161.639","east":"161.639"}
abstract Dataset consisting of amplicon sequencing samples (16S ssu rRNA targeting Bacteria), shotgun meta genome samples and RNA-seq samples of Paleomats at the shores of lake Vanda, McMurdo Dry Valleys, Antarctica

MiMarks Samples

MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
WA2a_16S WA2a_16S_unit WA3a_wgs_mini
WA3a_wgs_select WA3a_wgs_select_unit WA3a_wgs_notselect
WA3a_wgs_PB WA3a_wgs_PB_unit WA3a_RNA
WA3a_16S WA3a_16S_unit WA3b_16S
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
WA2a_16S WA2a_16S_unit WA3a_wgs_mini
WA3a_wgs_select WA3a_wgs_select_unit WA3a_wgs_notselect
WA3a_wgs_PB WA3a_wgs_PB_unit WA3a_RNA
WA3a_16S WA3a_16S_unit WA3b_16S
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
WA2a_16S WA2a_16S_unit WA3a_wgs_mini
WA3a_wgs_select WA3a_wgs_select_unit WA3a_wgs_notselect
WA3a_wgs_PB WA3a_wgs_PB_unit WA3a_RNA
WA3a_16S WA3a_16S_unit WA3b_16S
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
WA2a_16S WA2a_16S_unit WA3a_wgs_mini
WA3a_wgs_select WA3a_wgs_select_unit WA3a_wgs_notselect
WA3a_wgs_PB WA3a_wgs_PB_unit WA3a_RNA
WA3a_16S WA3a_16S_unit WA3b_16S
MiMARKS_investigation
Structured Comment Name Structured Comment Name_unit units
WA2a_16S WA2a_16S_unit WA3a_wgs_mini
WA3a_wgs_select WA3a_wgs_select_unit WA3a_wgs_notselect
WA3a_wgs_PB WA3a_wgs_PB_unit WA3a_RNA
WA3a_16S WA3a_16S_unit WA3b_16S
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
WA2a_16S WA2a_16S_unit WA3a_wgs_mini
WA3a_wgs_select WA3a_wgs_select_unit WA3a_wgs_notselect
WA3a_wgs_PB WA3a_wgs_PB_unit WA3a_RNA
WA3a_16S WA3a_16S_unit WA3b_16S
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
WA2a_16S WA2a_16S_unit WA3a_wgs_mini
WA3a_wgs_select WA3a_wgs_select_unit WA3a_wgs_notselect
WA3a_wgs_PB WA3a_wgs_PB_unit WA3a_RNA
WA3a_16S WA3a_16S_unit WA3b_16S
MiMARKS_environment
Structured Comment Name Structured Comment Name_unit units
WA2a_16S_unit WA3a_wgs_mini_unit WA3a_wgs_select_unit
WA3a_wgs_PB_unit WA3a_RNA_unit WA3a_16S_unit
MiMARKS_nucleic_acid_sequence_source
Structured Comment Name Structured Comment Name_unit units
WA2a_16S_unit WA3a_wgs_mini_unit WA3a_wgs_select_unit
WA3a_wgs_PB_unit WA3a_RNA_unit WA3a_16S_unit
MiMARKS_sequencing
Structured Comment Name Structured Comment Name_unit units
WA2a_16S WA2a_16S_unit WA3a_wgs_mini_unit
WA3a_wgs_notselect_unit WA3a_wgs_PB_unit WA3a_RNA_unit
MiMARKS_sequencing
Structured Comment Name Structured Comment Name_unit units
WA2a_16S WA2a_16S_unit WA3a_wgs_mini_unit
WA3a_wgs_notselect_unit WA3a_wgs_PB_unit WA3a_RNA_unit
MiMARKS_sequencing
Structured Comment Name Structured Comment Name_unit units
WA2a_16S WA2a_16S_unit WA3a_wgs_mini
WA3a_wgs_select WA3a_wgs_select_unit WA3a_wgs_notselect
WA3a_wgs_PB WA3a_wgs_PB_unit WA3a_RNA
WA3a_16S WA3a_16S_unit WA3b_16S
MiMARKS_sequencing
Structured Comment Name Structured Comment Name_unit units
WA2a_16S WA2a_16S_unit WA3a_wgs_mini_unit
WA3a_wgs_notselect_unit WA3a_wgs_PB_unit WA3a_RNA_unit
MiMARKS_sequencing
Structured Comment Name Structured Comment Name_unit units
WA2a_16S WA2a_16S_unit WA3a_wgs_mini
WA3a_wgs_select WA3a_wgs_select_unit WA3a_wgs_notselect
WA3a_wgs_PB WA3a_wgs_PB_unit WA3a_RNA
WA3a_16S WA3a_16S_unit WA3b_16S
package_soil
Structured Comment Name Structured Comment Name_unit units
WA2a_16S WA2a_16S_unit WA3a_wgs_mini
WA3a_wgs_select WA3a_wgs_select_unit WA3a_wgs_notselect
WA3a_wgs_PB WA3a_wgs_PB_unit WA3a_RNA
WA3a_16S WA3a_16S_unit WA3b_16S
miscellaneous
Structured Comment Name Structured Comment Name_unit units
WA2a_16S WA2a_16S_unit WA3a_wgs_mini
WA3a_wgs_select WA3a_wgs_select_unit WA3a_wgs_notselect
WA3a_wgs_PB WA3a_wgs_PB_unit WA3a_RNA
WA3a_16S WA3a_16S_unit WA3b_16S

Sequence sets

2016-12-10
study_type genbank_contigs sequencing_technology
sra_accession_number sra_project_number sra_run_number
number_of_spots_in_sra number_of_bases_predicted dataset_id
2016-12-10
study_type target_gene target_taxa
forward_primer reverse_primer forward_primer_sequence
genbank_contigs sequencing_technology has_next_generation_sequence_output_data
sra_project_number sra_run_number sra_sample_accession_numbers
number_of_bases_predicted dataset_id created_at
Position: